Pseudomonas putida S16, PPS_2248

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_2248
Name
Replicon chromosome
Genomic location 2530953 - 2531630 (+ strand)

Cross-References

RefSeq YP_004701689.1
GI 339487161
Entrez 10937892
INSDC AEJ12809.1
NCBI Locus Tag PPS_2248
UniParc UPI000217408E
UniProtKB Acc F8G3V0
UniProtKB ID F8G3V0_PSEP6
UniRef100 UniRef100_A0A099MXP2
UniRef50 UniRef50_A7IB76
UniRef90 UniRef90_V9X181

Product

Feature Type CDS
Coding Frame 1
Product Name
GntR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -0.07
Kyte-Doolittle Hydrophobicity Value -0.048
Molecular Weight (kDa) 25.1
Isoelectric Point (pI) 6.98

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 342 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG031338 (17 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_2248

Human Homologs

References

No references are associated with this feature.