Pseudomonas putida S16, PPS_2305
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas putida S16
GCF_000219705.1|latest |
| Locus Tag |
PPS_2305
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 2588140 - 2589315 (+ strand) |
Cross-References
| RefSeq | YP_004701746.1 |
| GI | 339487218 |
| Entrez | 10937949 |
| NCBI Locus Tag | PPS_2305 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
formaldehyde dehydrogenase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -2.64 |
| Kyte-Doolittle Hydrophobicity Value | 0.002 |
| Molecular Weight (kDa) | 41572.4 |
| Isoelectric Point (pI) | 6.67 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 1KOL | OXIDOREDUCTASE | 12/21/01 | Crystal structure of formaldehyde dehydrogenase | Pseudomonas putida | 1.65 | X-RAY DIFFRACTION | 94.9 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 529 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG003315 (1429 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PPS_2305
Search term: formaldehyde dehydrogenase
|
Human Homologs
References
No references are associated with this feature.