Pseudomonas putida S16, PPS_2407

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_2407
Name
Replicon chromosome
Genomic location 2710275 - 2711621 (+ strand)

Cross-References

RefSeq YP_004701848.1
GI 339487320
Entrez 10938051
INSDC AEJ12968.1
NCBI Locus Tag PPS_2407
UniParc UPI00021733F8
UniProtKB Acc F8G5F2
UniProtKB ID F8G5F2_PSEP6
UniRef100 UniRef100_F8G5F2
UniRef50 UniRef50_Q9I700
UniRef90 UniRef90_F8G5F2

Product

Feature Type CDS
Coding Frame 1
Product Name
beta alanine-pyruvate transaminase
Synonyms
Evidence for Translation
Charge (pH 7) -1.30
Kyte-Doolittle Hydrophobicity Value -0.046
Molecular Weight (kDa) 48.6
Isoelectric Point (pI) 6.83

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 639 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000130 (850 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_2407

Human Homologs

Ensembl 110, assembly GRCh38.p14
ornithine aminotransferase [Source:HGNC Symbol;Acc:HGNC:8091]
E-value: 7.4e-31
Percent Identity: 27.1

References

No references are associated with this feature.