Pseudomonas putida S16, PPS_2547

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_2547
Name
Replicon chromosome
Genomic location 2844940 - 2845671 (+ strand)

Cross-References

RefSeq YP_004701986.1
GI 339487458
Entrez 10938189
INSDC AEJ13106.1
NCBI Locus Tag PPS_2547
UniParc UPI0002173835
UniProtKB Acc F8FSG8
UniProtKB ID F8FSG8_PSEP6
UniRef100 UniRef100_A0A099N0V6
UniRef50 UniRef50_V4YMR9
UniRef90 UniRef90_Q88IW8

Product

Feature Type CDS
Coding Frame 1
Product Name
short-chain dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -1.65
Kyte-Doolittle Hydrophobicity Value -0.120
Molecular Weight (kDa) 26.8
Isoelectric Point (pI) 6.52

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 620 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000115 (445 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_2547

Human Homologs

References

No references are associated with this feature.