Pseudomonas putida S16, PPS_2805

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_2805
Name
Replicon chromosome
Genomic location 3113636 - 3114139 (- strand)

Cross-References

RefSeq YP_004702236.1
GI 339487708
Entrez 10938439
INSDC AEJ13356.1
NCBI Locus Tag PPS_2805
UniParc UPI0002173EAD
UniProtKB Acc F8FWF4
UniProtKB ID F8FWF4_PSEP6
UniRef100 UniRef100_L0FLL9
UniRef50 UniRef50_Q4KGV7
UniRef90 UniRef90_I7B6N7

Product

Feature Type CDS
Coding Frame 1
Product Name
XRE family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -5.32
Kyte-Doolittle Hydrophobicity Value -0.207
Molecular Weight (kDa) 18386.7
Isoelectric Point (pI) 5.53

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 278 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000224 (424 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_2805

Human Homologs

References

No references are associated with this feature.