Pseudomonas putida S16, PPS_3245
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas putida S16
GCF_000219705.1|latest |
| Locus Tag |
PPS_3245
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 3648418 - 3649092 (+ strand) |
Cross-References
| RefSeq | YP_004702672.1 |
| GI | 339488144 |
| Entrez | 10938875 |
| NCBI Locus Tag | PPS_3245 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
alginate lyase 2
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -4.87 |
| Kyte-Doolittle Hydrophobicity Value | -0.116 |
| Molecular Weight (kDa) | 24212.9 |
| Isoelectric Point (pI) | 5.23 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 4 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG016499 (56 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PPS_3245
Search term: alginate lyase 2
|
Human Homologs
References
No references are associated with this feature.