Pseudomonas putida S16, PPS_3444

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_3444
Name
Replicon chromosome
Genomic location 3872375 - 3873013 (- strand)

Cross-References

RefSeq YP_004702871.1
GI 339488343
Entrez 10939074
INSDC AEJ13991.1
NCBI Locus Tag PPS_3444
UniParc UPI00021740C4
UniProtKB Acc F8G5U2
UniProtKB ID F8G5U2_PSEP6
UniRef100 UniRef100_F8G5U2
UniRef50 UniRef50_Q4KDN1
UniRef90 UniRef90_Q1I8M4

Product

Feature Type CDS
Coding Frame 1
Product Name
TetR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -3.83
Kyte-Doolittle Hydrophobicity Value -0.195
Molecular Weight (kDa) 23936.2
Isoelectric Point (pI) 5.67

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 308 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000427 (435 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_3444

Human Homologs

References

No references are associated with this feature.