Pseudomonas putida S16, PPS_3834

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_3834
Name
Replicon chromosome
Genomic location 4324370 - 4325929 (- strand)

Cross-References

RefSeq YP_004703255.1
GI 339488727
Entrez 10939458
NCBI Locus Tag PPS_3834

Product

Feature Type CDS
Coding Frame 1
Product Name
TyrR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -1.15
Kyte-Doolittle Hydrophobicity Value -0.043
Molecular Weight (kDa) 56937.2
Isoelectric Point (pI) 6.83

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 457 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000840 (521 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_3834

Human Homologs

References

No references are associated with this feature.