Pseudomonas putida S16, PPS_3890

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_3890
Name
Replicon chromosome
Genomic location 4385409 - 4386626 (+ strand)

Cross-References

RefSeq YP_004703311.1
GI 339488783
Entrez 10939514
INSDC AEJ14431.1
NCBI Locus Tag PPS_3890
UniParc UPI0002173CD7
UniProtKB Acc F8FXV8
UniProtKB ID F8FXV8_PSEP6
UniRef100 UniRef100_F8FXV8
UniRef50 UniRef50_A0A084CJ14
UniRef90 UniRef90_A0A084CJ14

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -14.79
Kyte-Doolittle Hydrophobicity Value -0.466
Molecular Weight (kDa) 44405.8
Isoelectric Point (pI) 4.56

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 34 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG016807 (134 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_3890

Human Homologs

References

No references are associated with this feature.