Pseudomonas putida S16, PPS_3980

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_3980
Name
Replicon chromosome
Genomic location 4498887 - 4499759 (- strand)

Cross-References

RefSeq YP_004703401.1
GI 339488873
Entrez 10939604
INSDC AEJ14521.1
NCBI Locus Tag PPS_3980
UniParc UPI0002173FE6
UniProtKB Acc F8FZ97
UniProtKB ID F8FZ97_PSEP6
UniRef100 UniRef100_A0A099N511
UniRef50 UniRef50_Q9JZR4
UniRef90 UniRef90_B0KSY3

Product

Feature Type CDS
Coding Frame 1
Product Name
dihydrodipicolinate synthase
Synonyms
Evidence for Translation
Charge (pH 7) -3.74
Kyte-Doolittle Hydrophobicity Value -0.002
Molecular Weight (kDa) 31479.1
Isoelectric Point (pI) 6.35

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 633 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000973 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_3980

Human Homologs

References

No references are associated with this feature.