Pseudomonas putida S16, PPS_4008

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_4008
Name
Replicon chromosome
Genomic location 4526253 - 4526846 (+ strand)

Cross-References

RefSeq YP_004703429.1
GI 339488901
Entrez 10939632
NCBI Locus Tag PPS_4008

Product

Feature Type CDS
Coding Frame 1
Product Name
cold-shock DNA-binding domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7) 8.61
Kyte-Doolittle Hydrophobicity Value 0.355
Molecular Weight (kDa) 21.4
Isoelectric Point (pI) 10.45

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 488 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000926 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_4008

Human Homologs

References

No references are associated with this feature.