Pseudomonas putida S16, PPS_4125

Gene Feature Overview

Strain	Pseudomonas putida S16 GCF_000219705.1|latest
Locus Tag	PPS_4125
Name
Replicon	chromosome
Genomic location	4675444 - 4676211 (+ strand)

Cross-References

RefSeq	YP_004703544.1
GI	339489016
Entrez	10939747
INSDC	AEJ14664.1
NCBI Locus Tag	PPS_4125
UniParc	UPI000217330F
UniProtKB Acc	F8G1Y0
UniProtKB ID	F8G1Y0_PSEP6
UniRef100	UniRef100_A0A099N5B1
UniRef50	UniRef50_P21629
UniRef90	UniRef90_Q1IDT3

Product

Feature Type	CDS
Coding Frame	1
Product Name	leucine/isoleucine/valine transporter, ATP-binding subunit
Synonyms
Evidence for Translation
Charge (pH 7)	5.62
Kyte-Doolittle Hydrophobicity Value	-0.102
Molecular Weight (kDa)	28.3
Isoelectric Point (pI)	9.41

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001033 (533 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PPS_4125 Search term: leucine/isoleucine/valine transporter, ATP-binding subunit

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000396789 ATP binding cassette subfamily A member 13 [Source:HGNC Symbol;Acc:HGNC:14638] E-value: 1.7e-19 Percent Identity: 28.7
Ensembl 110, assembly GRCh38.p14	ENSP00000411096 ATP binding cassette subfamily A member 13 [Source:HGNC Symbol;Acc:HGNC:14638] E-value: 1.7e-19 Percent Identity: 28.7
Ensembl 110, assembly GRCh38.p14	ENSP00000442634 ATP binding cassette subfamily A member 13 [Source:HGNC Symbol;Acc:HGNC:14638] E-value: 1.7e-19 Percent Identity: 28.7

References