Pseudomonas putida S16, PPS_4196

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_4196
Name
Replicon chromosome
Genomic location 4755109 - 4756527 (- strand)

Cross-References

RefSeq YP_004703615.1
GI 339489087
Entrez 10939818
INSDC AEJ14735.1
NCBI Locus Tag PPS_4196
UniParc UPI0002173559
UniProtKB Acc F8G378
UniProtKB ID F8G378_PSEP6
UniRef100 UniRef100_F8G378
UniRef50 UniRef50_O34618
UniRef90 UniRef90_E2XM80

Product

Feature Type CDS
Coding Frame 1
Product Name
amino acid permease-associated protein
Synonyms
Evidence for Translation
Charge (pH 7) 9.85
Kyte-Doolittle Hydrophobicity Value 0.796
Molecular Weight (kDa) 50.7
Isoelectric Point (pI) 9.68

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 427 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000219 (3043 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_4196

Human Homologs

Ensembl 110, assembly GRCh38.p14
solute carrier family 7 member 14 [Source:HGNC Symbol;Acc:HGNC:29326]
E-value: 2.6e-18
Percent Identity: 24.7

References

No references are associated with this feature.