Pseudomonas putida S16, PPS_4231

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_4231
Name
Replicon chromosome
Genomic location 4795006 - 4796295 (+ strand)

Cross-References

RefSeq YP_004703648.1
GI 339489120
Entrez 10939851
INSDC AEJ14768.1
NCBI Locus Tag PPS_4231
UniParc UPI000217366B
UniProtKB Acc F8G3B1
UniProtKB ID F8G3B1_PSEP6
UniRef100 UniRef100_F8G3B1
UniRef50 UniRef50_W6QYC2
UniRef90 UniRef90_T2H2T2

Product

Feature Type CDS
Coding Frame 1
Product Name
outer membrane porin
Synonyms
Evidence for Translation
Charge (pH 7) -11.03
Kyte-Doolittle Hydrophobicity Value -0.362
Molecular Weight (kDa) 46.7
Isoelectric Point (pI) 4.72

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 24 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000729 (839 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_4231

Human Homologs

References

No references are associated with this feature.