Pseudomonas putida S16, PPS_4270

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_4270
Name
Replicon chromosome
Genomic location 4840514 - 4841770 (+ strand)

Cross-References

RefSeq YP_004703685.1
GI 339489157
Entrez 10939888
INSDC AEJ14805.1
NCBI Locus Tag PPS_4270
UniParc UPI0002173787
UniProtKB Acc F8G4B2
UniProtKB ID F8G4B2_PSEP6
UniRef100 UniRef100_F8G4B2
UniRef50 UniRef50_Q88JX6
UniRef90 UniRef90_T2H1G9

Product

Feature Type CDS
Coding Frame 1
Product Name
outer membrane porin
Synonyms
Evidence for Translation
Charge (pH 7) -0.58
Kyte-Doolittle Hydrophobicity Value -0.428
Molecular Weight (kDa) 46100.3
Isoelectric Point (pI) 6.81

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 18 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000239 (1158 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_4270

Human Homologs

References

No references are associated with this feature.