Pseudomonas putida S16, PPS_4272

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_4272
Name
Replicon chromosome
Genomic location 4842730 - 4843122 (- strand)

Cross-References

RefSeq YP_004703687.1
GI 339489159
Entrez 10939890
INSDC AEJ14807.1
NCBI Locus Tag PPS_4272
UniParc UPI0002173789
UniProtKB Acc F8G4B4
UniProtKB ID F8G4B4_PSEP6
UniRef100 UniRef100_M1M5F6
UniRef50 UniRef50_P20370
UniRef90 UniRef90_Q4KH29

Product

Feature Type CDS
Coding Frame 1
Product Name
4-carboxymuconolactone decarboxylase
Synonyms
Evidence for Translation
Charge (pH 7) -1.84
Kyte-Doolittle Hydrophobicity Value -0.449
Molecular Weight (kDa) 14.8
Isoelectric Point (pI) 6.35

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 248 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000231 (995 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_4272

Human Homologs

References

No references are associated with this feature.