Pseudomonas putida S16, PPS_4279

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_4279
Name
Replicon chromosome
Genomic location 4849768 - 4851150 (- strand)

Cross-References

RefSeq YP_004703694.1
GI 339489166
Entrez 10939897
INSDC AEJ14814.1
NCBI Locus Tag PPS_4279
UniParc UPI0002173790
UniProtKB Acc F8G4C1
UniProtKB ID F8G4C1_PSEP6
UniRef100 UniRef100_F8G4C1
UniRef50 UniRef50_Q51955
UniRef90 UniRef90_Q51955

Product

Feature Type CDS
Coding Frame 1
Product Name
benzoate transporter
Synonyms
Evidence for Translation
Charge (pH 7) 8.58
Kyte-Doolittle Hydrophobicity Value 0.745
Molecular Weight (kDa) 48628.0
Isoelectric Point (pI) 9.67

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 427 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000234 (2404 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_4279

Human Homologs

Ensembl 110, assembly GRCh38.p14
solute carrier family 22 member 1 [Source:HGNC Symbol;Acc:HGNC:10963]
E-value: 1.1e-08
Percent Identity: 31.3
Ensembl 110, assembly GRCh38.p14
solute carrier family 22 member 1 [Source:HGNC Symbol;Acc:HGNC:10963]
E-value: 1.1e-08
Percent Identity: 31.3
Ensembl 110, assembly GRCh38.p14
solute carrier family 22 member 1 [Source:HGNC Symbol;Acc:HGNC:10963]
E-value: 1.1e-08
Percent Identity: 31.3
Ensembl 110, assembly GRCh38.p14
solute carrier family 22 member 1 [Source:HGNC Symbol;Acc:HGNC:10963]
E-value: 1.1e-08
Percent Identity: 31.3

References

No references are associated with this feature.