Pseudomonas putida S16, PPS_4407

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_4407
Name
Replicon chromosome
Genomic location 4987830 - 4989308 (+ strand)

Cross-References

RefSeq YP_004703820.1
GI 339489292
Entrez 10940023
INSDC AEJ14940.1
NCBI Locus Tag PPS_4407
UniParc UPI0002173ACA
UniProtKB Acc F8G5D1
UniProtKB ID F8G5D1_PSEP6
UniRef100 UniRef100_V9X2U3
UniRef50 UniRef50_P18895
UniRef90 UniRef90_Q88NC8

Product

Feature Type CDS
Coding Frame 1
Product Name
outer membrane protein AlgE
Synonyms
Evidence for Translation
Charge (pH 7) -18.84
Kyte-Doolittle Hydrophobicity Value -0.597
Molecular Weight (kDa) 54.4
Isoelectric Point (pI) 4.65

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 5 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002122 (490 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_4407

Human Homologs

References

No references are associated with this feature.