Pseudomonas putida S16, PPS_4418

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_4418
Name
Replicon chromosome
Genomic location 5000076 - 5000891 (- strand)

Cross-References

RefSeq YP_004703829.1
GI 339489301
Entrez 10940032
INSDC AEJ14949.1
NCBI Locus Tag PPS_4418
UniParc UPI0002173BD7
UniProtKB Acc F8G5E0
UniProtKB ID F8G5E0_PSEP6
UniRef100 UniRef100_F8G5E0
UniRef50 UniRef50_R4Y1Z9
UniRef90 UniRef90_L0FQN0

Product

Feature Type CDS
Coding Frame 1
Product Name
short-chain dehydrogenase/reductase family protein
Synonyms
Evidence for Translation
Charge (pH 7) -5.79
Kyte-Doolittle Hydrophobicity Value 0.104
Molecular Weight (kDa) 29069.0
Isoelectric Point (pI) 5.17

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 652 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001279 (409 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_4418

Human Homologs

Ensembl 97, assembly GRCh38.p12
dehydrogenase/reductase 2 [Source:HGNC Symbol;Acc:HGNC:18349]
E-value: 5.4e-17
Percent Identity: 32.1

References

No references are associated with this feature.