Pseudomonas putida S16, PPS_5210

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_5210
Name
Replicon chromosome
Genomic location 5906863 - 5908071 (- strand)

Cross-References

RefSeq YP_004704617.1
GI 339490089
Entrez 10940820
INSDC AEJ15737.1
NCBI Locus Tag PPS_5210
UniParc UPI0002173151
UniProtKB Acc F8G0X5
UniProtKB ID F8G0X5_PSEP6
UniRef100 UniRef100_A0A099N6G2
UniRef50 UniRef50_Q14HK8
UniRef90 UniRef90_Q88C22

Product

Feature Type CDS
Coding Frame 1
Product Name
cobalamin synthesis protein P47K
Synonyms
Evidence for Translation
Charge (pH 7) -24.19
Kyte-Doolittle Hydrophobicity Value -0.262
Molecular Weight (kDa) 45.6
Isoelectric Point (pI) 4.44

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 365 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005068 (531 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_5210

Human Homologs

Ensembl 110, assembly GRCh38.p14
Zn regulated GTPase metalloprotein activator 1B [Source:HGNC Symbol;Acc:HGNC:17907]
E-value: 2.8e-29
Percent Identity: 31.0

References

No references are associated with this feature.