Pseudomonas putida BIRD-1, PPUBIRD1_0008 (aspA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas putida BIRD-1
GCF_000183645.1|latest |
| Locus Tag |
PPUBIRD1_0008
|
| Name |
aspA
|
| Replicon | chromosome |
| Genomic location | 4529 - 5986 (+ strand) |
Cross-References
| RefSeq | YP_005927923.1 |
| GI | 386009646 |
| EC Number | 4.3.1.1 |
| Entrez | 12522851 |
| NCBI Locus Tag | PPUBIRD1_0008 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
protein AspA
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -6.25 |
| Kyte-Doolittle Hydrophobicity Value | 0.090 |
| Molecular Weight (kDa) | 52422.1 |
| Isoelectric Point (pI) | 6.10 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 621 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG004982 (533 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PPUBIRD1_0008
Search term: aspA
Search term: protein AspA
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
fumarate hydratase [Source:HGNC Symbol;Acc:HGNC:3700]
E-value:
7.6e-98
Percent Identity:
41.9
|
References
No references are associated with this feature.