Pseudomonas putida BIRD-1, PPUBIRD1_0444

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida BIRD-1
GCF_000183645.1|latest
Locus Tag
PPUBIRD1_0444
Name
Replicon chromosome
Genomic location 516926 - 517597 (+ strand)

Cross-References

RefSeq YP_005928343.1
GI 386010066
Entrez 12518671
NCBI Locus Tag PPUBIRD1_0444

Product

Feature Type CDS
Coding Frame 1
Product Name
nucleotidyltransferase
Synonyms
Evidence for Translation
Charge (pH 7) -5.63
Kyte-Doolittle Hydrophobicity Value 0.029
Molecular Weight (kDa) 23.8
Isoelectric Point (pI) 5.97

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
4Y7T TRANSFERASE 02/16/15 Structural analysis of MurU Pseudomonas putida 1.8 X-RAY DIFFRACTION 100.0
4Y7V TRANSFERASE 02/16/15 Structural analysis of MurU Pseudomonas putida (strain BIRD-1) 1.8 X-RAY DIFFRACTION 100.0
4Y7U TRANSFERASE 02/16/15 Structural analysis of MurU Pseudomonas putida (strain BIRD-1) 1.7 X-RAY DIFFRACTION 100.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 626 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000580 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPUBIRD1_0444

Human Homologs

References

No references are associated with this feature.