Pseudomonas putida BIRD-1, PPUBIRD1_2990
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas putida BIRD-1
GCF_000183645.1|latest |
| Locus Tag |
PPUBIRD1_2990
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 3347190 - 3348539 (+ strand) |
Cross-References
| RefSeq | YP_005930807.1 |
| GI | 386012530 |
| EC Number | 4.3.1.18 |
| Entrez | 12521171 |
| NCBI Locus Tag | PPUBIRD1_2990 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
D-serine dehydratase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -11.75 |
| Kyte-Doolittle Hydrophobicity Value | -0.003 |
| Molecular Weight (kDa) | 47985.0 |
| Isoelectric Point (pI) | 5.37 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 108 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG002271 (357 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PPUBIRD1_2990
Search term: D-serine dehydratase
|
Human Homologs
References
No references are associated with this feature.