Pseudomonas putida BIRD-1, PPUBIRD1_3210 (rplT)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas putida BIRD-1
GCF_000183645.1|latest
Locus Tag
PPUBIRD1_3210
Name
rplT
Replicon chromosome
Genomic location 3597203 - 3597559 (- strand)

Cross-References

RefSeq YP_005931014.1
GI 386012737
Entrez 12521379
NCBI Locus Tag PPUBIRD1_3210

Product

Feature Type CDS
Coding Frame 1
Product Name
protein RplT
Synonyms
Evidence for Translation
Charge (pH 7) 26.22
Kyte-Doolittle Hydrophobicity Value -0.280
Molecular Weight (kDa) 13.3
Isoelectric Point (pI) 12.13

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 591 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002830 (546 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPUBIRD1_3210
Search term: rplT
Search term: protein RplT

Human Homologs

Ensembl 97, assembly GRCh38.p12
mitochondrial ribosomal protein L20 [Source:HGNC Symbol;Acc:HGNC:14478]
E-value: 1.9e-11
Percent Identity: 39.6

References

No references are associated with this feature.