Pseudomonas putida BIRD-1, PPUBIRD1_3219

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas putida BIRD-1
GCF_000183645.1|latest
Locus Tag
PPUBIRD1_3219
Name
Replicon chromosome
Genomic location 3603380 - 3603778 (- strand)

Cross-References

RefSeq YP_005931023.1
GI 386012746
Entrez 12521388
NCBI Locus Tag PPUBIRD1_3219

Product

Feature Type CDS
Coding Frame 1
Product Name
D-ribose pyranase
Synonyms
Evidence for Translation
Charge (pH 7) 0.68
Kyte-Doolittle Hydrophobicity Value 0.283
Molecular Weight (kDa) 14.3
Isoelectric Point (pI) 7.62

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 131 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG015716 (197 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPUBIRD1_3219
Search term: D-ribose pyranase

References

No references are associated with this feature.