Pseudomonas putida BIRD-1, PPUBIRD1_4131 (nadB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida BIRD-1
GCF_000183645.1|latest
Locus Tag
PPUBIRD1_4131
Name
nadB
Replicon chromosome
Genomic location 4616294 - 4617868 (+ strand)

Cross-References

RefSeq YP_005931917.1
GI 386013640
EC Number 1.4.3.16
Entrez 12522310
NCBI Locus Tag PPUBIRD1_4131

Product

Feature Type CDS
Coding Frame 1
Product Name
NadB protein
Synonyms
Evidence for Translation
Charge (pH 7) -12.23
Kyte-Doolittle Hydrophobicity Value -0.161
Molecular Weight (kDa) 57917.1
Isoelectric Point (pI) 5.96

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 608 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000735 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPUBIRD1_4131
Search term: nadB
Search term: NadB protein

Human Homologs

Ensembl 110, assembly GRCh38.p14
succinate dehydrogenase complex flavoprotein subunit A [Source:HGNC Symbol;Acc:HGNC:10680]
E-value: 6.2e-61
Percent Identity: 33.3

References

No references are associated with this feature.