Strain |
Pseudomonas putida BIRD-1
GCF_000183645.1|latest |
Locus Tag |
PPUBIRD1_4181
|
Name |
|
Replicon | chromosome |
Genomic location | 4670054 - 4671406 (- strand) |
RefSeq | YP_005931965.1 |
GI | 386013688 |
EC Number | 5.5.1.2 |
Entrez | 12522359 |
NCBI Locus Tag | PPUBIRD1_4181 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
3-carboxy-cis,cis-muconate cycloisomerase
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | -3.77 |
Kyte-Doolittle Hydrophobicity Value | 0.034 |
Molecular Weight (kDa) | 48.2 |
Isoelectric Point (pI) | 6.51 |
Individual Mappings | |
Additional evidence for subcellular localization |
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
1RE5 | ISOMERASE | 11/06/03 | Crystal structure of 3-carboxy-cis,cis-muconate lactonizing enzyme from Pseudomonas putida | Pseudomonas putida | 2.6 | X-RAY DIFFRACTION | 99.6 |
Identified by Diamond using e-value cutoff of 0.0001 and returning alignments that span 100% of the query sequence and that have more than 95% identity.
Drug Name | Source Accession | Source DB | Version | Target Accession | Target Description | Percent Identity | Alignment Length | E-Value |
Citric acid | DB04272 | DrugBank | 5.1.4 | P32427 | 3-carboxy-cis,cis-muconate cycloisomerase | 95.3 | 422 | 3.8e-221 |
1,4-Dithiothreitol | DB04447 | DrugBank | 5.1.4 | P32427 | 3-carboxy-cis,cis-muconate cycloisomerase | 95.3 | 422 | 3.8e-221 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 647 genera
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Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG000229 (504 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PPUBIRD1_4181
Search term: 3-carboxy-cis,cis-muconate cycloisomerase
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