Pseudomonas putida BIRD-1, PPUBIRD1_4754

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida BIRD-1
GCF_000183645.1|latest
Locus Tag
PPUBIRD1_4754
Name
Replicon chromosome
Genomic location 5312116 - 5312574 (- strand)

Cross-References

RefSeq YP_005932517.1
GI 386014240
Entrez 12522928
NCBI Locus Tag PPUBIRD1_4754

Product

Feature Type CDS
Coding Frame 1
Product Name
Cytochrome c', putative
Synonyms
Evidence for Translation
Charge (pH 7) 2.10
Kyte-Doolittle Hydrophobicity Value -0.358
Molecular Weight (kDa) 16763.0
Isoelectric Point (pI) 8.11

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 38 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000525 (500 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPUBIRD1_4754

Human Homologs

References

No references are associated with this feature.