Pseudomonas putida BIRD-1, PPUBIRD1_4884
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas putida BIRD-1
GCF_000183645.1|latest |
| Locus Tag |
PPUBIRD1_4884
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 5472420 - 5473238 (+ strand) |
Cross-References
| RefSeq | YP_005932642.1 |
| GI | 386014365 |
| EC Number | 1.5.1.2 |
| Entrez | 12523053 |
| NCBI Locus Tag | PPUBIRD1_4884 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
Pyrroline-5-carboxylate reductase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -6.61 |
| Kyte-Doolittle Hydrophobicity Value | 0.107 |
| Molecular Weight (kDa) | 28222.8 |
| Isoelectric Point (pI) | 4.69 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 591 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000384 (535 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PPUBIRD1_4884
Search term: Pyrroline-5-carboxylate reductase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
pyrroline-5-carboxylate reductase 1 [Source:HGNC Symbol;Acc:HGNC:9721]
E-value:
2.3e-35
Percent Identity:
37.9
|
|
Ensembl
110, assembly
GRCh38.p14
|
pyrroline-5-carboxylate reductase 1 [Source:HGNC Symbol;Acc:HGNC:9721]
E-value:
2.3e-35
Percent Identity:
37.9
|
|
Ensembl
110, assembly
GRCh38.p14
|
pyrroline-5-carboxylate reductase 1 [Source:HGNC Symbol;Acc:HGNC:9721]
E-value:
2.3e-35
Percent Identity:
37.9
|
|
Ensembl
110, assembly
GRCh38.p14
|
pyrroline-5-carboxylate reductase 1 [Source:HGNC Symbol;Acc:HGNC:9721]
E-value:
2.3e-35
Percent Identity:
37.9
|
References
No references are associated with this feature.