Pseudomonas putida HB3267, B479_00660

Gene Feature Overview

Strain	Pseudomonas putida HB3267 GCF_000325725.1|latest
Locus Tag	B479_00660
Name
Replicon	chromosome
Genomic location	148404 - 149714 (- strand)

Cross-References

RefSeq	YP_007226993.1
GI	431800090
Entrez	14286541
INSDC	AGA71050.1
NCBI Locus Tag	B479_00660
UniParc	UPI0002172348
UniProtKB Acc	L0FDL1
UniProtKB ID	L0FDL1_PSEPU
UniRef100	UniRef100_F8FU68
UniRef50	UniRef50_Q88B41
UniRef90	UniRef90_Q88RR3

Product

Feature Type	CDS
Coding Frame	1
Product Name	16S rRNA methyltransferase B
Synonyms
Evidence for Translation
Charge (pH 7)	-1.88
Kyte-Doolittle Hydrophobicity Value	-0.109
Molecular Weight (kDa)	47.4
Isoelectric Point (pI)	6.67

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 581 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000017 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: B479_00660 Search term: 16S rRNA methyltransferase B

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000313272 NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867] E-value: 9.2e-26 Percent Identity: 31.4
Ensembl 110, assembly GRCh38.p14	ENSP00000371858 NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867] E-value: 9.2e-26 Percent Identity: 31.4
Ensembl 110, assembly GRCh38.p14	ENSP00000439422 NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867] E-value: 9.2e-26 Percent Identity: 31.4
Ensembl 110, assembly GRCh38.p14	ENSP00000382392 NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867] E-value: 9.2e-26 Percent Identity: 31.4
Ensembl 110, assembly GRCh38.p14	ENSP00000444437 NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867] E-value: 9.2e-26 Percent Identity: 31.4
Ensembl 110, assembly GRCh38.p14	ENSP00000443150 NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867] E-value: 9.2e-26 Percent Identity: 31.4

References