Pseudomonas putida HB3267, B479_00680

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida HB3267
GCF_000325725.1|latest
Locus Tag
B479_00680
Name
Replicon chromosome
Genomic location 152558 - 153115 (+ strand)

Cross-References

RefSeq YP_007226997.1
GI 431800094
Entrez 14286545
INSDC AGA71054.1
NCBI Locus Tag B479_00680
UniParc UPI0002A1724E
UniProtKB Acc L0FB82
UniProtKB ID L0FB82_PSEPU
UniRef100 UniRef100_L0FB82
UniRef50 UniRef50_Q88RQ9
UniRef90 UniRef90_Q88RQ9

Product

Feature Type CDS
Coding Frame 1
Product Name
SUA5/yciO/yrdC domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7) -1.14
Kyte-Doolittle Hydrophobicity Value -0.124
Molecular Weight (kDa) 20.4
Isoelectric Point (pI) 6.51

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 632 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000022 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: B479_00680

Human Homologs

Ensembl 110, assembly GRCh38.p14
yrdC N6-threonylcarbamoyltransferase domain containing [Source:HGNC Symbol;Acc:HGNC:28905]
E-value: 3.0e-10
Percent Identity: 27.6

References

No references are associated with this feature.