Pseudomonas putida HB3267, B479_03970

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida HB3267
GCF_000325725.1|latest
Locus Tag
B479_03970
Name
Replicon chromosome
Genomic location 905673 - 908084 (+ strand)

Cross-References

RefSeq YP_007227653.1
GI 431800750
Entrez 14287201
INSDC AGA71710.1
NCBI Locus Tag B479_03970
UniParc UPI0002A17A91
UniProtKB Acc L0FGB5
UniProtKB ID L0FGB5_PSEPU
UniRef100 UniRef100_L0FGB5
UniRef50 UniRef50_Q9I3T6
UniRef90 UniRef90_Q88PZ1

Product

Feature Type CDS
Coding Frame 1
Product Name
mechanosensitive ion channel protein MscS
Synonyms
Evidence for Translation
Charge (pH 7) 4.14
Kyte-Doolittle Hydrophobicity Value 0.425
Molecular Weight (kDa) 86731.4
Isoelectric Point (pI) 8.76

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 568 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001329 (414 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: B479_03970

Human Homologs

References

No references are associated with this feature.