Pseudomonas putida HB3267, B479_14050

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida HB3267
GCF_000325725.1|latest
Locus Tag
B479_14050
Name
Replicon chromosome
Genomic location 3084988 - 3089223 (- strand)

Cross-References

RefSeq YP_007229647.1
GI 431802744
Entrez 14289195
INSDC AGA73704.1
NCBI Locus Tag B479_14050
UniParc UPI0002A17535
UniProtKB Acc L0FIC1
UniProtKB ID L0FIC1_PSEPU
UniRef100 UniRef100_L0FIC1
UniRef50 UniRef50_I7CEU0
UniRef90 UniRef90_L0FIC1

Product

Feature Type CDS
Coding Frame 1
Product Name
YD repeat-containing protein
Synonyms
Evidence for Translation
Charge (pH 7) -18.14
Kyte-Doolittle Hydrophobicity Value -0.485
Molecular Weight (kDa) 158017.5
Isoelectric Point (pI) 6.17

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 212 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000092 (1670 members)
Putative Inparalogs 1 predicted inparalogs
YD repeat-containing protein (B479_07815) 74.1% identity

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: B479_14050

Human Homologs

References

No references are associated with this feature.