Pseudomonas putida HB3267, B479_14935

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida HB3267
GCF_000325725.1|latest
Locus Tag
B479_14935
Name
Replicon chromosome
Genomic location 3303568 - 3304263 (+ strand)

Cross-References

RefSeq YP_007229824.1
GI 431802921
Entrez 14289372
INSDC AGA73881.1
NCBI Locus Tag B479_14935
UniParc UPI0002A16903
UniProtKB Acc L0FMA0
UniProtKB ID L0FMA0_PSEPU
UniRef100 UniRef100_A0A099N072
UniRef50 UniRef50_E1VBZ7
UniRef90 UniRef90_I7B4U4

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA-binding transcriptional regulator CsiR
Synonyms
Evidence for Translation
Charge (pH 7) 3.37
Kyte-Doolittle Hydrophobicity Value -0.242
Molecular Weight (kDa) 26.1
Isoelectric Point (pI) 8.47

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 319 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG015971 (49 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: B479_14935

Human Homologs

References

No references are associated with this feature.