Pseudomonas putida HB3267, B479_21470

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida HB3267
GCF_000325725.1|latest
Locus Tag
B479_21470
Name
Replicon chromosome
Genomic location 4727871 - 4729127 (+ strand)

Cross-References

RefSeq YP_007231126.1
GI 431804223
Entrez 14290674
INSDC AGA75183.1
NCBI Locus Tag B479_21470
UniParc UPI0002A15292
UniProtKB Acc L0FQ93
UniProtKB ID L0FQ93_PSEPU
UniRef100 UniRef100_L0FQ93
UniRef50 UniRef50_Q88JX6
UniRef90 UniRef90_T2H1G9

Product

Feature Type CDS
Coding Frame 1
Product Name
outer membrane porin
Synonyms
Evidence for Translation
Charge (pH 7) -3.58
Kyte-Doolittle Hydrophobicity Value -0.424
Molecular Weight (kDa) 46082.2
Isoelectric Point (pI) 6.01

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 18 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000239 (1158 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: B479_21470

Human Homologs

References

No references are associated with this feature.