Pseudomonas putida HB3267, B479_22685

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida HB3267
GCF_000325725.1|latest
Locus Tag
B479_22685
Name
Replicon chromosome
Genomic location 4987950 - 4989221 (- strand)

Cross-References

RefSeq YP_007231369.1
GI 431804466
Entrez 14290917
INSDC AGA75426.1
NCBI Locus Tag B479_22685
UniParc UPI0002A17D20
UniProtKB Acc L0FRQ2
UniProtKB ID L0FRQ2_PSEPU
UniRef100 UniRef100_L0FRQ2
UniRef50 UniRef50_G8Q662
UniRef90 UniRef90_I7C4V8

Product

Feature Type CDS
Coding Frame 1
Product Name
diguanylate cyclase
Synonyms
Evidence for Translation
Charge (pH 7) 0.08
Kyte-Doolittle Hydrophobicity Value -0.125
Molecular Weight (kDa) 46478.2
Isoelectric Point (pI) 7.01

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 456 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001080 (443 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: B479_22685

Human Homologs

References

No references are associated with this feature.