Pseudomonas putida HB3267, B479_24275 (pgk)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida HB3267
GCF_000325725.1|latest
Locus Tag
B479_24275
Name
pgk
Replicon chromosome
Genomic location 5351825 - 5352988 (- strand)

Cross-References

RefSeq YP_007231687.1
GI 431804784
EC Number 2.7.2.3
Entrez 14291235
INSDC AGA75744.1
NCBI Locus Tag B479_24275
UniParc UPI0002173695
UniProtKB Acc L0FP58
UniProtKB ID L0FP58_PSEPU
UniRef100 UniRef100_F8FU45
UniRef50 UniRef50_P43726
UniRef90 UniRef90_Q1I3Y0

Product

Feature Type CDS
Coding Frame 1
Product Name
phosphoglycerate kinase
Synonyms
Evidence for Translation
Charge (pH 7) -8.88
Kyte-Doolittle Hydrophobicity Value 0.305
Molecular Weight (kDa) 40.0
Isoelectric Point (pI) 4.93

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
6I06 TRANSFERASE 10/25/18 Crystal structure of psychrophilic phosphoglycerate kinase from Pseudomonas TACII18 Pseudomonas 2 X-RAY DIFFRACTION 92.8
6HXE TRANSFERASE 10/17/18 Crystal structure of psychrophilic phosphoglycerate kinase from Pseudomonas TACII18 in complex with 3-phosphoglycerate Pseudomonas sp. 'TAC II 18' 2.1 X-RAY DIFFRACTION 92.5

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 664 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000536 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: B479_24275
Search term: pgk

Human Homologs

Ensembl 110, assembly GRCh38.p14
phosphoglycerate kinase 1 [Source:HGNC Symbol;Acc:HGNC:8896]
E-value: 3.7e-63
Percent Identity: 38.7

References

No references are associated with this feature.