Pseudomonas putida HB3267, B479_25400

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida HB3267
GCF_000325725.1|latest
Locus Tag
B479_25400
Name
Replicon chromosome
Genomic location 5610780 - 5611868 (- strand)

Cross-References

RefSeq YP_007231912.1
GI 431805009
Entrez 14291460
INSDC AGA75969.1
NCBI Locus Tag B479_25400
UniParc UPI0002A16E1D
UniProtKB Acc L0FPT7
UniProtKB ID L0FPT7_PSEPU
UniRef100 UniRef100_L0FPT7
UniRef50 UniRef50_Q4KK51
UniRef90 UniRef90_T2HDV1

Product

Feature Type CDS
Coding Frame 1
Product Name
RND family efflux transporter, MFP subunit
Synonyms
Evidence for Translation
Charge (pH 7) -1.33
Kyte-Doolittle Hydrophobicity Value -0.019
Molecular Weight (kDa) 38297.4
Isoelectric Point (pI) 6.31

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 407 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000154 (998 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: B479_25400

Human Homologs

References

No references are associated with this feature.