Pseudomonas putida HB3267, B479_26480

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida HB3267
GCF_000325725.1|latest
Locus Tag
B479_26480
Name
Replicon chromosome
Genomic location 5843613 - 5844479 (- strand)

Cross-References

RefSeq YP_007232126.1
GI 431805223
Entrez 14291674
INSDC AGA76183.1
NCBI Locus Tag B479_26480
UniParc UPI0000D7923B
UniProtKB Acc L0FT14
UniProtKB ID L0FT14_PSEPU
UniRef100 UniRef100_A0A099N648
UniRef50 UniRef50_C1DH57
UniRef90 UniRef90_Q4K3G5

Product

Feature Type CDS
Coding Frame 1
Product Name
RpiR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 1.00
Kyte-Doolittle Hydrophobicity Value 0.147
Molecular Weight (kDa) 31.0
Isoelectric Point (pI) 7.19

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 229 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004989 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: B479_26480

Human Homologs

References

No references are associated with this feature.