Pseudomonas syringae pv. syringae B728a, Psyr_0013

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_0013
Name
Replicon chromosome
Genomic location 14995 - 15546 (+ strand)

Cross-References

RefSeq YP_233125.1
GI 66043284
EC Number 3.2.2.20
Entrez 3365488
INSDC AAY35087.1
NCBI Locus Tag Psyr_0013
UniParc UPI0000394ED7
UniProtKB Acc Q500T5
UniProtKB ID Q500T5_PSEU2
UniRef100 UniRef100_Q500T5
UniRef50 UniRef50_D7HT80
UniRef90 UniRef90_D7HT80

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA-3-methyladenine glycosylase I
Synonyms
Evidence for Translation
Charge (pH 7) 0.83
Kyte-Doolittle Hydrophobicity Value -0.068
Molecular Weight (kDa) 20.9
Isoelectric Point (pI) 7.45

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 355 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000010 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_0013

Human Homologs

References

No references are associated with this feature.