Pseudomonas syringae pv. syringae B728a, Psyr_0025 (aroE)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest |
| Locus Tag |
Psyr_0025
|
| Name |
aroE
|
| Replicon | chromosome |
| Genomic location | 28635 - 29459 (+ strand) |
Cross-References
| RefSeq | YP_233137.1 |
| GI | 66043296 |
| EC Number | 1.1.1.25 |
| Entrez | 3365500 |
| NCBI Locus Tag | Psyr_0025 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
shikimate 5-dehydrogenase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -7.37 |
| Kyte-Doolittle Hydrophobicity Value | 0.043 |
| Molecular Weight (kDa) | 29.3 |
| Isoelectric Point (pI) | 4.70 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 601 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000025 (538 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: Psyr_0025
Search term: aroE
Search term: shikimate 5-dehydrogenase
|
Human Homologs
References
No references are associated with this feature.