Pseudomonas syringae pv. syringae B728a, Psyr_0028

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_0028
Name
Replicon chromosome
Genomic location 31768 - 32694 (- strand)

Cross-References

RefSeq YP_233140.1
GI 66043299
Entrez 3365503
INSDC AAY35102.1
NCBI Locus Tag Psyr_0028
UniParc UPI0000394EE6
UniProtKB Acc Q500S0
UniProtKB ID Q500S0_PSEU2
UniRef100 UniRef100_Q500S0
UniRef50 UniRef50_G8PX81
UniRef90 UniRef90_Q88B53

Product

Feature Type CDS
Coding Frame 1
Product Name
substrate-binding region of ABC-type glycine betaine transport system
Synonyms
Evidence for Translation
Charge (pH 7) 1.66
Kyte-Doolittle Hydrophobicity Value -0.046
Molecular Weight (kDa) 33203.0
Isoelectric Point (pI) 8.16

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 134 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000030 (491 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_0028

Human Homologs

References

No references are associated with this feature.