Pseudomonas syringae pv. syringae B728a, Psyr_1390

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_1390
Name
Replicon chromosome
Genomic location 1571249 - 1571959 (- strand)

Cross-References

RefSeq YP_234479.1
GI 66044638
Entrez 3366885
INSDC AAY36441.1
NCBI Locus Tag Psyr_1390
UniParc UPI000039538E
UniProtKB Acc Q4ZWN1
UniProtKB ID Q4ZWN1_PSEU2
UniRef100 UniRef100_Q4ZWN1
UniRef50 UniRef50_Q48FA5
UniRef90 UniRef90_Q48FA5

Product

Feature Type CDS
Coding Frame 1
Product Name
RNA-binding S4
Synonyms
Evidence for Translation
Charge (pH 7) 5.38
Kyte-Doolittle Hydrophobicity Value -0.262
Molecular Weight (kDa) 26346.3
Isoelectric Point (pI) 9.40

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 476 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001070 (526 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_1390
Search term: RNA-binding S4

Human Homologs

References

No references are associated with this feature.