Pseudomonas syringae pv. syringae B728a, Psyr_2143

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_2143
Name
Replicon chromosome
Genomic location 2502154 - 2503185 (+ strand)

Cross-References

RefSeq YP_235224.1
GI 66045383
Entrez 3367657
INSDC AAY37186.1
NCBI Locus Tag Psyr_2143
UniParc UPI000050D849
UniProtKB Acc Q4ZUI6
UniProtKB ID Q4ZUI6_PSEU2
UniRef100 UniRef100_Q4ZUI6
UniRef50 UniRef50_Q5FB93
UniRef90 UniRef90_Q4U331

Product

Feature Type CDS
Coding Frame 1
Product Name
malate/L-lactate dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -3.17
Kyte-Doolittle Hydrophobicity Value -0.013
Molecular Weight (kDa) 36.0
Isoelectric Point (pI) 6.51

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
2CWH OXIDOREDUCTASE 06/20/05 Crystal Structure of delta1-piperideine-2-carboxylate reductase from Pseudomonas syringae complexed with NADPH and pyrrole-2-carboxylate Pseudomonas syringae pv. tomato 1.7 X-RAY DIFFRACTION 91.0
2CWF OXIDOREDUCTASE 06/20/05 Crystal Structure of delta1-piperideine-2-carboxylate reductase from Pseudomonas syringae complexed with NADPH Pseudomonas syringae pv. tomato 1.8 X-RAY DIFFRACTION 91.0
1WTJ OXIDOREDUCTASE 11/24/04 Crystal Structure of delta1-piperideine-2-carboxylate reductase from Pseudomonas syringae pvar.tomato Pseudomonas syringae pv. tomato 1.55 X-RAY DIFFRACTION 91.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 206 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001204 (489 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_2143

Human Homologs

References

No references are associated with this feature.