Pseudomonas syringae pv. syringae B728a, Psyr_2171

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_2171
Name
Replicon chromosome
Genomic location 2524631 - 2525446 (- strand)

Cross-References

RefSeq YP_235252.1
GI 66045411
Entrez 3367686
INSDC AAY37214.1
NCBI Locus Tag Psyr_2171
UniParc UPI0000394C5C
UniProtKB Acc Q4ZUF8
UniProtKB ID Q4ZUF8_PSEU2
UniRef100 UniRef100_Q4ZUF8
UniRef50 UniRef50_Q2KX55
UniRef90 UniRef90_Q4ZUF8

Product

Feature Type CDS
Coding Frame 1
Product Name
HpcH/HpaI aldolase
Synonyms
Evidence for Translation
Charge (pH 7) -4.37
Kyte-Doolittle Hydrophobicity Value 0.143
Molecular Weight (kDa) 28.9
Isoelectric Point (pI) 5.90

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 283 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000850 (424 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_2171

Human Homologs

Ensembl 110, assembly GRCh38.p14
citramalyl-CoA lyase [Source:HGNC Symbol;Acc:HGNC:18355]
E-value: 2.9e-22
Percent Identity: 28.6
Ensembl 110, assembly GRCh38.p14
citramalyl-CoA lyase [Source:HGNC Symbol;Acc:HGNC:18355]
E-value: 2.9e-22
Percent Identity: 28.6
Ensembl 110, assembly GRCh38.p14
citramalyl-CoA lyase [Source:HGNC Symbol;Acc:HGNC:18355]
E-value: 2.9e-22
Percent Identity: 28.6

References

No references are associated with this feature.