Pseudomonas syringae pv. syringae B728a, Psyr_2628
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest |
| Locus Tag |
Psyr_2628
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 3188330 - 3189022 (- strand) |
Cross-References
| RefSeq | YP_235705.1 |
| GI | 66045864 |
| Entrez | 3368145 |
| NCBI Locus Tag | Psyr_2628 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
ABC transporter
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -0.41 |
| Kyte-Doolittle Hydrophobicity Value | 0.244 |
| Molecular Weight (kDa) | 24673.3 |
| Isoelectric Point (pI) | 6.88 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000072 (411 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: Psyr_2628
Search term: ABC transporter
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily B member 11 [Source:HGNC Symbol;Acc:HGNC:42]
E-value:
3.7e-10
Percent Identity:
27.6
|
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily B member 11 [Source:HGNC Symbol;Acc:HGNC:42]
E-value:
3.7e-10
Percent Identity:
27.6
|
References
No references are associated with this feature.