Pseudomonas syringae pv. syringae B728a, Psyr_3159

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_3159
Name
Replicon chromosome
Genomic location 3786200 - 3787549 (- strand)

Cross-References

RefSeq YP_236229.1
GI 66046388
Entrez 3368680
INSDC AAY38191.1
NCBI Locus Tag Psyr_3159
UniParc UPI000050D99D
UniProtKB Acc Q4ZRN1
UniProtKB ID Q4ZRN1_PSEU2
UniRef100 UniRef100_Q4ZRN1
UniRef50 UniRef50_Q4K5P1
UniRef90 UniRef90_Q87ZU6

Product

Feature Type CDS
Coding Frame 1
Product Name
Type I secretion outer membrane protein, TolC
Synonyms
Evidence for Translation
Charge (pH 7) -0.57
Kyte-Doolittle Hydrophobicity Value -0.450
Molecular Weight (kDa) 50.2
Isoelectric Point (pI) 6.81

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 257 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001200 (760 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_3159

Human Homologs

References

No references are associated with this feature.