Pseudomonas syringae pv. syringae B728a, Psyr_3438

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a - Assembly GCF_000012245.1
GCF_000012245.1|latest
Locus Tag
Psyr_3438
Name
Replicon chromosome
Genomic location 4101313 - 4102146 (- strand)

Cross-References

RefSeq YP_236508.1
GI 66046667
Entrez 3368965
INSDC AAY38470.1
NCBI Locus Tag Psyr_3438
UniParc UPI0000395930
UniProtKB Acc Q4ZQV2
UniProtKB ID Q4ZQV2_PSEU2
UniRef100 UniRef100_A0A038GAJ1
UniRef50 UniRef50_G3XD64
UniRef90 UniRef90_Q4KG41

Product

Feature Type CDS
Coding Frame 1
Product Name
cobyrinic acid a,c-diamide synthase
Synonyms
Evidence for Translation
Charge (pH 7) 2.08
Kyte-Doolittle Hydrophobicity Value 0.177
Molecular Weight (kDa) 29.8
Isoelectric Point (pI) 7.98

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
5J1J TRANSCRIPTION 03/29/16 Structure of FleN-AMPPNP complex PSEUDOMONAS AERUGINOSA PAO1 1.55 X-RAY DIFFRACTION 91.6
5JVF TRANSCRIPTION 05/11/16 Crystal Structure of Apo-FleN PSEUDOMONAS AERUGINOSA PAO1 1.66 X-RAY DIFFRACTION 91.6

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 623 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001369 (552 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_3438

References

No references are associated with this feature.