Pseudomonas syringae pv. syringae B728a, Psyr_3556 (alaS)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_3556
Name
alaS
Replicon chromosome
Genomic location 4235102 - 4237801 (- strand)

Cross-References

RefSeq YP_236626.1
GI 66046785
EC Number 6.1.1.7
Entrez 3369087
INSDC AAY38588.1
NCBI Locus Tag Psyr_3556
UniParc UPI00003959A2
UniProtKB Acc Q4ZQI4
UniProtKB ID SYA_PSEU2
UniRef100 UniRef100_Q4ZQI4
UniRef50 UniRef50_Q6D1T0
UniRef90 UniRef90_Q4ZQI4

Product

Feature Type CDS
Coding Frame 1
Product Name
alanyl-tRNA synthetase
Synonyms
Evidence for Translation
Charge (pH 7) -24.88
Kyte-Doolittle Hydrophobicity Value -0.157
Molecular Weight (kDa) 97031.8
Isoelectric Point (pI) 5.12

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 666 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000870 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_3556
Search term: alaS

Human Homologs

Ensembl 110, assembly GRCh38.p14
alanyl-tRNA synthetase 1 [Source:HGNC Symbol;Acc:HGNC:20]
E-value: 1.5e-131
Percent Identity: 36.0

References

No references are associated with this feature.