Pseudomonas syringae pv. syringae B728a, Psyr_3954

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_3954
Name
Replicon chromosome
Genomic location 4700728 - 4702524 (- strand)

Cross-References

RefSeq YP_237022.1
GI 66047181
Entrez 3369489
INSDC AAY38984.1
NCBI Locus Tag Psyr_3954
UniParc UPI000050DA6D
UniProtKB Acc Q4ZPD8
UniProtKB ID LEPA_PSEU2
UniRef100 UniRef100_Q4ZPD8
UniRef50 UniRef50_O67618
UniRef90 UniRef90_Q87XF8

Product

Feature Type CDS
Coding Frame 1
Product Name
GTP-binding protein LepA
Synonyms
Evidence for Translation
Charge (pH 7) -11.57
Kyte-Doolittle Hydrophobicity Value -0.063
Molecular Weight (kDa) 66.2
Isoelectric Point (pI) 5.65

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000741 (533 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_3954

Human Homologs

Ensembl 110, assembly GRCh38.p14
GTP binding elongation factor GUF1 [Source:HGNC Symbol;Acc:HGNC:25799]
E-value: 4.0e-173
Percent Identity: 49.2

References

No references are associated with this feature.